binned.C

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/*---------------------------------------------------------------------------*\
  =========                 |
  \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
   \\    /   O peration     |
    \\  /    A nd           | www.openfoam.com
     \\/     M anipulation  |
-------------------------------------------------------------------------------
    Copyright (C) 2015-2016 OpenCFD Ltd.
-------------------------------------------------------------------------------
License
    This file is part of OpenFOAM.
 
    OpenFOAM is free software: you can redistribute it and/or modify it
    under the terms of the GNU General Public License as published by
    the Free Software Foundation, either version 3 of the License, or
    (at your option) any later version.
 
    OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
    ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
    FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
    for more details.
 
    You should have received a copy of the GNU General Public License
    along with OpenFOAM.  If not, see <http://www.gnu.org/licenses/>.
 
\*---------------------------------------------------------------------------*/
 
#include "binned.H"
#include "addToRunTimeSelectionTable.H"
 
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
 
namespace Foam
{
    namespace distributionModels
    {
        defineTypeNameAndDebug(binned, 0);
        addToRunTimeSelectionTable(distributionModel, binned, dictionary);
    }
}
 
 
const char* Foam::distributionModels::binned::header =
    "(bin probability)";
 
 
// * * * * * * * * * * * * * Private Member Functions  * * * * * * * * * * * //
 
void Foam::distributionModels::binned::initialise()
{
    const label nSample(xy_.size());
 
    // Convert values to integral values
    for (label bini = 1; bini < nSample; ++bini)
    {
        xy_[bini][1] += xy_[bini - 1][1];
    }
 
    // Normalise
    scalar sumProb = xy_.last()[1];
    forAll(xy_, bini)
    {
        xy_[bini][1] /= sumProb;
    }
 
    // Calculate the mean value
    label bini = 0;
    forAll(xy_, i)
    {
        if (xy_[i][1] > 0.5)
        {
            bini = i;
            break;
        }
    }
 
    meanValue_ = xy_[bini][1];
}
 
 
// * * * * * * * * * * * * * * * * Constructors  * * * * * * * * * * * * * * //
 
Foam::distributionModels::binned::binned
(
    const dictionary& dict,
    Random& rndGen
)
:
    distributionModel(typeName, dict, rndGen),
    xy_(distributionModelDict_.lookup("distribution")),
    meanValue_(0)
{
    if (maxValue() < minValue())
    {
        FatalErrorInFunction
            << "Maximum value is smaller than the minimum value:"
            << "    maxValue = " << maxValue()
            << ", minValue = " << minValue()
            << exit(FatalError);
    }
 
    initialise();
}
 
 
Foam::distributionModels::binned::binned
(
    const UList<scalar>& sampleData,
    const scalar binWidth,
    Random& rndGen
)
:
    distributionModel(typeName, dictionary::null, rndGen),
    xy_(),
    meanValue_(0)
{
    scalar minValue = GREAT;
    scalar maxValue = -GREAT;
    forAll(sampleData, i)
    {
        minValue = min(minValue, sampleData[i]);
        maxValue = max(maxValue, sampleData[i]);
    }
 
    const label bin0 = floor(minValue/binWidth);
    const label bin1 = ceil(maxValue/binWidth);
    const label nBin = bin1 - bin0;
 
    if (nBin == 0)
    {
        WarningInFunction
            << "Data cannot be binned - zero bins generated" << nl
            << "   Bin width   : " << binWidth << nl
            << "   Sample data : " << sampleData
            << endl;
 
        return;
    }
 
    // Populate bin boundaries and initialise occurrences
    xy_.setSize(nBin);
    forAll(xy_, bini)
    {
        xy_[bini][0] = (bin0 + bini)*binWidth;
        xy_[bini][1] = 0;
    }
 
    // Bin the data
    forAll(sampleData, i)
    {
        // Choose the nearest bin
        label bini = floor(sampleData[i]/binWidth) - bin0;
        label binii = min(bini + 1, nBin - 1);
 
        scalar d1 = mag(sampleData[i] - xy_[bini][0]);
        scalar d2 = mag(xy_[binii][0] - sampleData[i]);
 
        if (d1 < d2)
        {
            xy_[bini][1]++;
        }
        else
        {
            xy_[binii][1]++;
        }
    }
 
    initialise();
}
 
 
Foam::distributionModels::binned::binned(const binned& p)
:
    distributionModel(p),
    xy_(p.xy_),
    meanValue_(p.meanValue_)
{}
 
 
// * * * * * * * * * * * * * * * * Destructor  * * * * * * * * * * * * * * * //
 
Foam::distributionModels::binned::~binned()
{}
 
 
// * * * * * * * * * * * * * * * Member Functions  * * * * * * * * * * * * * //
 
Foam::scalar Foam::distributionModels::binned::sample() const
{
    scalar y = rndGen_.sample01<scalar>();
 
    for (label i = 0; i < xy_.size() - 1; ++i)
    {
        if (xy_[i][1] > y)
        {
            return xy_[i][0];
        }
    }
 
    return xy_.last()[0];
}
 
 
Foam::scalar Foam::distributionModels::binned::minValue() const
{
    return xy_.first()[0];
}
 
 
Foam::scalar Foam::distributionModels::binned::maxValue() const
{
    return xy_.last()[0];
}
 
 
Foam::scalar Foam::distributionModels::binned::meanValue() const
{
    return meanValue_;
}
 
 
void Foam::distributionModels::binned::readData(Istream& is)
{
//    distributionModel::readData(is);
    is  >> xy_;
}
 
 
void Foam::distributionModels::binned::writeData(Ostream& os) const
{
//    distributionModel::writeData(os);
    os  << xy_ ;
}
 
 
Foam::dictionary Foam::distributionModels::binned::writeDict
(
    const word& dictName
) const
{
//    dictionary dict = distributionModel::writeDict(dictName);
    dictionary dict(dictName);
    dict.add("distribution", xy_);
 
    return dict;
}
 
 
void Foam::distributionModels::binned::readDict(const dictionary& dict)
{
//    distributionModel::readDict(dict);
    dict.readEntry("distribution", xy_);
}
 
 
Foam::Ostream& Foam::operator<<
(
    Ostream& os,
    const distributionModels::binned& b
)
{
    os.check(FUNCTION_NAME);
 
    b.writeData(os);
    return os;
}
 
 
Foam::Istream& Foam::operator>>(Istream& is, distributionModels::binned& b)
{
    is.check(FUNCTION_NAME);
 
    b.readData(is);
    return is;
}
 
 
// ************************************************************************* //