A surface formed by the iso value. After "Polygonising A Scalar Field Using Tetrahedrons", Paul Bourke (http://paulbourke.net/geometry/polygonise) and "Regularised Marching Tetrahedra: improved iso-surface extraction", G.M. Treece, R.W. Prager and A.H. Gee. More...
Public Types | |
enum | filterType |
Filtering type. More... | |
Public Types inherited from isoSurfaceBase | |
enum | algorithmType : uint8_t { ALGO_POINT, ALGO_CELL, ALGO_TOPO } |
The algorithm types. More... | |
enum | filterType : uint8_t { NONE = 0, CELL, DIAGCELL, PARTIAL = CELL, FULL = DIAGCELL } |
The filtering (regularization) to apply. More... | |
Public Types inherited from MeshedSurface< face > | |
typedef face | face_type |
The face type (same as the underlying PrimitivePatch) More... | |
typedef point | point_type |
The point type (same as the underlying PrimitivePatch) More... | |
Public Member Functions | |
TypeName ("isoSurfaceCell") | |
Runtime type information. More... | |
isoSurfaceCell (const polyMesh &mesh, const scalarField &cellValues, const scalarField &pointValues, const scalar iso, const isoSurfaceBase::filterType filter, const boundBox &bounds=boundBox::invertedBox, const scalar mergeTol=1e-6, const bitSet &ignoreCells=bitSet()) | |
Construct from cell and point values. More... | |
isoSurfaceCell (const polyMesh &mesh, const scalarField &cellValues, const scalarField &pointValues, const scalar iso, const bool regularise, const boundBox &bounds=boundBox::invertedBox, const scalar mergeTol=1e-6, const bitSet &ignoreCells=bitSet()) | |
Construct from cell and point values. More... | |
template<class Type > | |
tmp< Field< Type > > | interpolate (const Field< Type > &cCoords, const Field< Type > &pCoords) const |
Interpolates cCoords, pCoords. More... | |
template<class Type > | |
Foam::tmp< Foam::Field< Type > > | interpolate (const Field< Type > &cCoords, const Field< Type > &pCoords) const |
Public Member Functions inherited from isoSurfaceBase | |
isoSurfaceBase (const scalar iso, const boundBox &bounds=boundBox::invertedBox) | |
Construct with iso value. More... | |
scalar | isoValue () const |
The iso-value associated with the surface. More... | |
const labelList & | meshCells () const |
For each face, the original cell in mesh. More... | |
labelList & | meshCells () |
For each face, the original cell in mesh. More... | |
Public Member Functions inherited from MeshedSurface< face > | |
MeshedSurface () | |
Default construct, an empty surface. More... | |
MeshedSurface (const MeshedSurface &surf) | |
Copy construct. More... | |
MeshedSurface (const UnsortedMeshedSurface< face > &surf) | |
Copy construct from an UnsortedMeshedSurface. More... | |
MeshedSurface (MeshedSurface &&surf) | |
Move construct. More... | |
MeshedSurface (UnsortedMeshedSurface< face > &&surf) | |
Move construct from an UnsortedMeshedSurface. More... | |
MeshedSurface (const pointField &pointLst, const UList< face > &faceLst, const UList< surfZone > &zoneLst) | |
Copy construct from components (points, faces, zones). More... | |
MeshedSurface (pointField &&pointLst, List< face > &&faceLst, const UList< surfZone > &zoneLst) | |
Move construct from components (points, faces). More... | |
MeshedSurface (const pointField &pointLst, const UList< face > &faceLst, const labelUList &zoneSizes=labelUList(), const UList< word > &zoneNames=UList< word >()) | |
Copy construct from components (points, faces). More... | |
MeshedSurface (pointField &&pointLst, List< face > &&faceLst, const labelUList &zoneSizes=labelUList(), const UList< word > &zoneNames=UList< word >()) | |
Move construct from components (points, faces). More... | |
MeshedSurface (const polyBoundaryMesh &bMesh, const bool globalPoints=false) | |
Construct from a boundary mesh with local points/faces. More... | |
MeshedSurface (const surfMesh &mesh) | |
Construct from a surfMesh. More... | |
MeshedSurface (const fileName &name) | |
Construct from file name (uses extension to determine type) More... | |
MeshedSurface (const fileName &name, const word &fileType) | |
Construct from file name and given file type. More... | |
MeshedSurface (Istream &is) | |
Construct from Istream. More... | |
MeshedSurface (const Time &runTime) | |
Construct from database (as surfMesh) with default name. More... | |
MeshedSurface (const Time &runTime, const word &surfName) | |
Construct from database (as surfMesh) with given surface name. More... | |
MeshedSurface (const IOobject &io, const dictionary &dict, const bool isGlobal=true) | |
Read construct using IO to find the file location. More... | |
MeshedSurface (const MeshedSurface< face > &surf) | |
MeshedSurface (MeshedSurface< face > &&surf) | |
bool | read (const fileName &name, const word &fileType) |
Read from file. Chooses reader based on explicit extension. More... | |
virtual bool | read (const fileName &name) |
Read from file. Chooses reader based on detected extension. More... | |
virtual void | write (const fileName &name, IOstreamOption streamOpt=IOstreamOption(), const dictionary &options=dictionary::null) const |
Generic write routine. Chooses writer based on extension. More... | |
virtual void | write (const fileName &name, const word &fileType, IOstreamOption streamOpt=IOstreamOption(), const dictionary &options=dictionary::null) const |
Generic write routine for given format type. More... | |
void | write (const Time &runTime, const word &surfName=word::null) const |
Write to database. More... | |
ClassName ("MeshedSurface") | |
Declare type-name (with debug switch) More... | |
declareRunTimeSelectionTable (autoPtr, MeshedSurface, fileExtension,(const fileName &name),(name)) | |
virtual | ~MeshedSurface () |
Destructor. More... | |
declareMemberFunctionSelectionTable (void, UnsortedMeshedSurface, write, fileExtension,(const fileName &name, const MeshedSurface< face > &surf, IOstreamOption streamOpt, const dictionary &options),(name, surf, streamOpt, options)) | |
label | size () const |
The surface size is the number of faces. More... | |
const List< face > & | surfFaces () const |
Return const access to the faces. More... | |
const labelList & | faceIds () const |
Return const access to faces ids. More... | |
const surfZoneList & | surfZones () const |
Const access to the surface zones. More... | |
const vectorField & | Sf () const |
Face area vectors (normals) More... | |
const scalarField & | magSf () const |
Face area magnitudes. More... | |
const vectorField & | Cf () const |
Face centres. More... | |
virtual void | clear () |
Clear all storage. More... | |
virtual void | addZones (const UList< surfZone > &, const bool cullEmpty=false) |
Add surface zones. More... | |
virtual void | addZones (const labelUList &sizes, const UList< word > &names, const bool cullEmpty=false) |
Add surface zones. More... | |
virtual void | addZones (const labelUList &sizes, const bool cullEmpty=false) |
Add surface zones. More... | |
bool | addZonesToFaces () |
Propagate zone information on face regions. More... | |
bool | addZonesToFaces () |
Specialization for labelledTri. More... | |
bool | addZonesToFaces () |
virtual void | removeZones () |
Remove surface zones. More... | |
virtual void | movePoints (const pointField &newPoints) |
Move points. More... | |
virtual void | scalePoints (const scalar scaleFactor) |
Scale points. A non-positive factor is ignored. More... | |
virtual void | cleanup (const bool verbose) |
Remove invalid faces. More... | |
virtual bool | stitchFaces (const scalar tol=SMALL, const bool verbose=false) |
virtual bool | checkFaces (const bool verbose=false) |
virtual label | nTriangles () const |
Count number of triangles. More... | |
virtual label | nTriangles (labelList &faceMap) const |
Count number of triangles, returning a face map of original ids. More... | |
virtual label | triangulate () |
Triangulate in-place, returning the number of triangles added. More... | |
virtual label | triangulate (labelList &faceMap) |
Triangulate in-place, returning the number of triangles added. More... | |
void | subsetMeshMap (const BoolListType &include, labelList &pointMap, labelList &faceMap) const |
Create mappings for a sub-surface. More... | |
MeshedSurface | subsetMesh (const UList< bool > &include, labelList &pointMap, labelList &faceMap) const |
Return a new surface subsetted on the selected faces. More... | |
MeshedSurface | subsetMesh (const bitSet &include, labelList &pointMap, labelList &faceMap) const |
Return a new surface subsetted on the selected faces. More... | |
MeshedSurface | subsetMesh (const UList< bool > &include) const |
Return a new surface subsetted on the selected faces. More... | |
MeshedSurface | subsetMesh (const bitSet &include) const |
Return a new surface subsetted on the selected faces. More... | |
MeshedSurface | subsetMesh (const wordRes &includeNames, const wordRes &excludeNames=wordRes()) const |
Return a new surface subsetted on the selected zone names. More... | |
void | swap (MeshedSurface< face > &surf) |
Swap contents. More... | |
void | transfer (pointField &pointLst, List< face > &faceLst) |
Transfer the components. More... | |
void | transfer (MeshedSurface< face > &surf) |
Transfer the contents of the argument and annul the argument. More... | |
void | transfer (UnsortedMeshedSurface< face > &surf) |
Transfer the contents of the argument and annul the argument. More... | |
autoPtr< MeshedSurface< face > > | releaseGeom () |
Release (clear) geometry and return for reuse. More... | |
void | swapFaces (List< face > &faces) |
Swap the stored faces. Use with caution. More... | |
void | swapPoints (pointField &points) |
Swap the stored points. More... | |
void | writeStats (Ostream &os) const |
void | operator= (const MeshedSurface< face > &surf) |
Copy assignment. More... | |
void | operator= (MeshedSurface< face > &&surf) |
Move assignment. More... | |
operator MeshedSurfaceProxy< face > () const | |
Conversion operator to MeshedSurfaceProxy. More... | |
Additional Inherited Members | |
Static Public Member Functions inherited from isoSurfaceBase | |
static filterType | getFilterType (const dictionary &dict, const isoSurfaceBase::filterType deflt) |
Get 'regularise' as bool or enumeration. More... | |
Static Public Member Functions inherited from MeshedSurface< face > | |
static void | write (const fileName &name, const MeshedSurface< face > &surf, IOstreamOption streamOpt=IOstreamOption(), const dictionary &options=dictionary::null) |
Write to file, selecting writer based on its extension. More... | |
static void | write (const fileName &name, const word &fileType, const MeshedSurface< face > &surf, IOstreamOption streamOpt=IOstreamOption(), const dictionary &options=dictionary::null) |
Write to file, selecting writer based on the given extension. More... | |
static wordHashSet | readTypes () |
Known readable file-types, without friends or proxies. More... | |
static wordHashSet | writeTypes () |
Known writable file-types, without friends or proxies. More... | |
static bool | canReadType (const word &fileType, bool verbose=false) |
Can we read this file format? Also checks friend types. More... | |
static bool | canWriteType (const word &fileType, bool verbose=false) |
Can we write this file format? Also checks proxy types. More... | |
static bool | canRead (const fileName &name, bool verbose=false) |
Can we read this file format? More... | |
static autoPtr< MeshedSurface > | New (const fileName &name, const word &fileType, bool mandatory=true) |
Read construct from filename with given file type. More... | |
static autoPtr< MeshedSurface > | New (const fileName &name) |
Read construct from filename (file type implicit from extension) More... | |
Static Public Attributes inherited from isoSurfaceBase | |
static const Enum< algorithmType > | algorithmNames |
Names for the iso-surface algorithms. More... | |
static const Enum< filterType > | filterNames |
Names for the filtering types. More... | |
Protected Types inherited from isoSurfaceBase | |
typedef meshedSurface | MeshStorage |
Protected Member Functions inherited from MeshedSurface< face > | |
void | transcribe (MeshedSurface< face > &surf) |
Transfer points/zones from 'face' to other other shapes. More... | |
void | transcribe (MeshedSurface< face > &surf) |
void | transcribe (MeshedSurface< face > &surf) |
void | transcribe (MeshedSurface< face > &surf) |
void | checkZones () |
Basic sanity check on zones. More... | |
pointField & | storedPoints () |
Non-const access to global points. More... | |
List< face > & | storedFaces () |
Non-const access to the faces. More... | |
labelList & | storedFaceIds () |
Non-const access to face ids. More... | |
surfZoneList & | storedZones () |
Non-const access to the zones. More... | |
void | sortFacesAndStore (DynamicList< face > &unsortedFaces, DynamicList< label > &zoneIds, DynamicList< label > &elemIds, bool sorted) |
Sort faces by zones and store sorted faces. More... | |
virtual void | remapFaces (const labelUList &faceMapNewToOld) |
Set new zones from faceMap. More... | |
Protected Attributes inherited from isoSurfaceBase | |
const scalar | iso_ |
Iso value. More... | |
const boundBox | bounds_ |
Optional bounds. More... | |
labelList | meshCells_ |
For every face, the original cell in mesh. More... | |
A surface formed by the iso value. After "Polygonising A Scalar Field Using Tetrahedrons", Paul Bourke (http://paulbourke.net/geometry/polygonise) and "Regularised Marching Tetrahedra: improved iso-surface extraction", G.M. Treece, R.W. Prager and A.H. Gee.
See isoSurface. This is a variant which does tetrahedrisation from triangulation of face to cell centre instead of edge of face to two neighbouring cell centres. This gives much lower quality triangles but they are local to a cell.
Definition at line 69 of file isoSurfaceCell.H.
|
strong |
Filtering type.
Definition at line 87 of file isoSurfaceBase.H.
isoSurfaceCell | ( | const polyMesh & | mesh, |
const scalarField & | cellValues, | ||
const scalarField & | pointValues, | ||
const scalar | iso, | ||
const isoSurfaceBase::filterType | filter, | ||
const boundBox & | bounds = boundBox::invertedBox , |
||
const scalar | mergeTol = 1e-6 , |
||
const bitSet & | ignoreCells = bitSet() |
||
) |
Construct from cell and point values.
bounds | optional bounding box for trimming |
mergeTol | fraction of mesh bounding box for merging points |
ignoreCells | cells to ignore in the cellValues |
Definition at line 1292 of file isoSurfaceCell.C.
isoSurfaceCell | ( | const polyMesh & | mesh, |
const scalarField & | cellValues, | ||
const scalarField & | pointValues, | ||
const scalar | iso, | ||
const bool | regularise, | ||
const boundBox & | bounds = boundBox::invertedBox , |
||
const scalar | mergeTol = 1e-6 , |
||
const bitSet & | ignoreCells = bitSet() |
||
) |
Construct from cell and point values.
bounds | optional bounding box for trimming |
mergeTol | fraction of mesh bounding box for merging points |
ignoreCells | cells to ignore in the cellValues |
Definition at line 1318 of file isoSurfaceCell.C.
References polyMesh::bounds(), triSurface::clearOut(), Foam::expressions::patchExpr::debug, Foam::dimless, Foam::endl(), Foam::findIndices(), forAll, Foam::inplaceRenumber(), tetMatcher::isA(), boundBox::mag(), Foam::max(), mesh, Foam::min(), Foam::nl, IOobject::NO_READ, IOobject::NO_WRITE, Foam::Pout, GeometricField< Type, PatchField, GeoMesh >::primitiveFieldRef(), List< T >::setSize(), DynamicList< T, SizeMin >::shrink(), FixedList< T, N >::size(), triSurface::swapPoints(), fvMesh::time(), Time::timeName(), List< T >::transfer(), triSurface::triFaceFaces(), triSurfaceTools::validTri(), Ostream::write(), and Foam::Zero.
TypeName | ( | "isoSurfaceCell" | ) |
Runtime type information.
tmp<Field<Type> > interpolate | ( | const Field< Type > & | cCoords, |
const Field< Type > & | pCoords | ||
) | const |
Interpolates cCoords, pCoords.
Foam::tmp<Foam::Field<Type> > interpolate | ( | const Field< Type > & | cCoords, |
const Field< Type > & | pCoords | ||
) | const |
Definition at line 473 of file isoSurfaceCellTemplates.C.
References points.