Class containing processor-to-processor mapping information. More...
Public Member Functions | |
ClassName ("mapDistributeBase") | |
mapDistributeBase (const label comm=UPstream::worldComm) | |
Construct null. More... | |
mapDistributeBase (const mapDistributeBase &map) | |
Copy construct. More... | |
mapDistributeBase (mapDistributeBase &&map) | |
Move construct. More... | |
mapDistributeBase (const label constructSize, labelListList &&subMap, labelListList &&constructMap, const bool subHasFlip=false, const bool constructHasFlip=false, const label comm=UPstream::worldComm) | |
Construct from components. More... | |
mapDistributeBase (const labelUList &sendProcs, const labelUList &recvProcs, const label comm=UPstream::worldComm) | |
Construct from reverse addressing: per data item the send. More... | |
mapDistributeBase (const globalIndex &, labelList &elements, List< Map< label >> &compactMap, const int tag=Pstream::msgType(), const label comm=UPstream::worldComm) | |
Construct from list of (possibly) remote elements in globalIndex. More... | |
mapDistributeBase (const globalIndex &, labelListList &cellCells, List< Map< label >> &compactMap, const int tag=Pstream::msgType(), const label comm=UPstream::worldComm) | |
Special variant that works with the info sorted into bins. More... | |
mapDistributeBase (labelListList &&subMap, const bool subHasFlip=false, const bool constructHasFlip=false, const label comm=UPstream::worldComm) | |
Construct from my elements to send. Assumes layout is my elements. More... | |
mapDistributeBase (Istream &is) | |
Construct from Istream. More... | |
label | constructSize () const |
Constructed data size. More... | |
label & | constructSize () |
Constructed data size. More... | |
const labelListList & | subMap () const |
From subsetted data back to original data. More... | |
labelListList & | subMap () |
From subsetted data back to original data. More... | |
const labelListList & | constructMap () const |
From subsetted data to new reconstructed data. More... | |
labelListList & | constructMap () |
From subsetted data to new reconstructed data. More... | |
bool | subHasFlip () const |
Does subMap include a sign. More... | |
bool & | subHasFlip () |
Does subMap include a sign. More... | |
bool | constructHasFlip () const |
Does constructMap include a sign. More... | |
bool & | constructHasFlip () |
Does constructMap include a sign. More... | |
label | comm () const |
const List< labelPair > & | schedule () const |
Return a schedule. Demand driven. See above. More... | |
void | transfer (mapDistributeBase &rhs) |
Transfer the contents of the argument and annul the argument. More... | |
void | compact (const boolList &elemIsUsed, const int tag=UPstream::msgType()) |
Compact maps. Gets per field a bool whether it is used (locally) More... | |
void | compact (const boolList &elemIsUsed, const label localSize, labelList &oldToNewSub, labelList &oldToNewConstruct, const int tag=UPstream::msgType()) |
Compact all maps and layout. Returns compaction maps for. More... | |
template<class T > | |
void | distribute (List< T > &fld, const int tag=UPstream::msgType()) const |
Distribute data using default commsType. More... | |
template<class T , class negateOp > | |
void | distribute (List< T > &fld, const negateOp &negOp, const int tag=UPstream::msgType()) const |
Distribute data using default commsType. More... | |
template<class T > | |
void | distribute (DynamicList< T > &fld, const int tag=UPstream::msgType()) const |
Distribute data using default commsType. More... | |
template<class T > | |
void | reverseDistribute (const label constructSize, List< T > &, const int tag=UPstream::msgType()) const |
Reverse distribute data using default commsType. More... | |
template<class T > | |
void | reverseDistribute (const label constructSize, const T &nullValue, List< T > &fld, const int tag=UPstream::msgType()) const |
Reverse distribute data using default commsType. More... | |
template<class T > | |
void | send (PstreamBuffers &, const List< T > &) const |
Do all sends using PstreamBuffers. More... | |
template<class T > | |
void | receive (PstreamBuffers &, List< T > &) const |
Do all receives using PstreamBuffers. More... | |
void | printLayout (Ostream &os) const |
Debug: print layout. Can only be used on maps with sorted. More... | |
void | updateMesh (const mapPolyMesh &) |
Correct for topo change. More... | |
void | operator= (const mapDistributeBase &rhs) |
Copy assignment. More... | |
void | operator= (mapDistributeBase &&rhs) |
Move assignment. More... | |
Static Public Member Functions | |
static List< labelPair > | schedule (const labelListList &subMap, const labelListList &constructMap, const int tag, const label comm=UPstream::worldComm) |
Calculate a schedule. See above. More... | |
static label | renumber (const globalIndex &, const List< Map< label >> &compactMap, const label globalElement) |
Helper for construct from globalIndex. Renumbers element. More... | |
template<class T , class negateOp > | |
static void | distribute (const Pstream::commsTypes commsType, const List< labelPair > &schedule, const label constructSize, const labelListList &subMap, const bool subHasFlip, const labelListList &constructMap, const bool constructHasFlip, List< T > &, const negateOp &negOp, const int tag=UPstream::msgType(), const label comm=UPstream::worldComm) |
Distribute data. Note:schedule only used for. More... | |
template<class T , class CombineOp , class negateOp > | |
static void | distribute (const Pstream::commsTypes commsType, const List< labelPair > &schedule, const label constructSize, const labelListList &subMap, const bool subHasFlip, const labelListList &constructMap, const bool constructHasFlip, List< T > &, const T &nullValue, const CombineOp &cop, const negateOp &negOp, const int tag=UPstream::msgType(), const label comm=UPstream::worldComm) |
Distribute data. If multiple processors writing to same. More... | |
Protected Member Functions | |
void | calcCompactAddressing (const globalIndex &globalNumbering, const labelUList &elements, List< Map< label >> &compactMap) const |
Construct per processor compact addressing of the global elements. More... | |
void | calcCompactAddressing (const globalIndex &globalNumbering, const labelListList &elements, List< Map< label >> &compactMap) const |
void | exchangeAddressing (const int tag, const globalIndex &globalNumbering, labelList &elements, List< Map< label >> &compactMap, labelList &compactStart) |
void | exchangeAddressing (const int tag, const globalIndex &globalNumbering, labelListList &elements, List< Map< label >> &compactMap, labelList &compactStart) |
Static Protected Member Functions | |
static void | checkReceivedSize (const label proci, const label expectedSize, const label receivedSize) |
template<class T , class CombineOp , class negateOp > | |
static void | flipAndCombine (const labelUList &map, const bool hasFlip, const UList< T > &rhs, const CombineOp &cop, const negateOp &negOp, List< T > &lhs) |
template<class T , class negateOp > | |
static T | accessAndFlip (const UList< T > &fld, const label index, const bool hasFlip, const negateOp &negOp) |
Protected Attributes | |
label | constructSize_ |
Size of reconstructed data. More... | |
labelListList | subMap_ |
Maps from subsetted data back to original data. More... | |
labelListList | constructMap_ |
Maps from subsetted data to new reconstructed data. More... | |
bool | subHasFlip_ |
Whether subMap includes flip or not. More... | |
bool | constructHasFlip_ |
Whether constructMap includes flip or not. More... | |
label | comm_ |
Communicator to use for parallel operations. More... | |
autoPtr< List< labelPair > > | schedulePtr_ |
Schedule. More... | |
Friends | |
Istream & | operator>> (Istream &, mapDistributeBase &) |
Read dictionary from Istream. More... | |
Ostream & | operator<< (Ostream &, const mapDistributeBase &) |
Write dictionary to Ostream. More... | |
Class containing processor-to-processor mapping information.
We store mapping from the bits-to-send to the complete starting list (subXXXMap) and from the received bits to their location in the new list (constructXXXMap).
Note: Schedule is a list of processor pairs (one send, one receive. One of them will be myself) which forms a scheduled (i.e. non-buffered) exchange. See distribute on how to use it. Note2: number of items sent on one processor have to equal the number of items received on the other processor.
To aid constructing these maps there are the constructors from global numbering, either with or without transforms.
Constructors using compact numbering: layout is
It rewrites the input global indices into indices into the constructed data.
When constructing from components optionally a 'flip' on the maps can be specified. This will interpret the map values as index+flip, similar to e.g. faceProcAddressing. The flip will only be applied to fieldTypes (scalar, vector, .. triad)
Definition at line 103 of file mapDistributeBase.H.
mapDistributeBase | ( | const label | comm = UPstream::worldComm | ) |
Construct null.
Definition at line 566 of file mapDistributeBase.C.
mapDistributeBase | ( | const mapDistributeBase & | map | ) |
Copy construct.
Definition at line 577 of file mapDistributeBase.C.
mapDistributeBase | ( | mapDistributeBase && | map | ) |
Move construct.
Definition at line 589 of file mapDistributeBase.C.
References mapDistributeBase::transfer().
mapDistributeBase | ( | const label | constructSize, |
labelListList && | subMap, | ||
labelListList && | constructMap, | ||
const bool | subHasFlip = false , |
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const bool | constructHasFlip = false , |
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const label | comm = UPstream::worldComm |
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) |
Construct from components.
Definition at line 598 of file mapDistributeBase.C.
mapDistributeBase | ( | const labelUList & | sendProcs, |
const labelUList & | recvProcs, | ||
const label | comm = UPstream::worldComm |
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) |
Construct from reverse addressing: per data item the send.
processor and the receive processor. (note: data is not stored sorted per processor so cannot use printLayout).
Definition at line 618 of file mapDistributeBase.C.
References Foam::abort(), Foam::FatalError, FatalErrorInFunction, forAll, UPstream::myProcNo(), UPstream::nProcs(), List< T >::setSize(), UList< T >::size(), and Foam::Zero.
mapDistributeBase | ( | const globalIndex & | globalNumbering, |
labelList & | elements, | ||
List< Map< label >> & | compactMap, | ||
const int | tag = Pstream::msgType() , |
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const label | comm = UPstream::worldComm |
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) |
Construct from list of (possibly) remote elements in globalIndex.
numbering (or -1). Determines compact numbering (see above) and distribute map to get data into this ordering and renumbers the elements to be in compact numbering.
Definition at line 697 of file mapDistributeBase.C.
References Foam::expressions::patchExpr::debug, and Foam::Pout.
mapDistributeBase | ( | const globalIndex & | globalNumbering, |
labelListList & | cellCells, | ||
List< Map< label >> & | compactMap, | ||
const int | tag = Pstream::msgType() , |
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const label | comm = UPstream::worldComm |
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) |
Special variant that works with the info sorted into bins.
according to local indices. E.g. think cellCells where cellCells[localCellI] is a list of global cells
Definition at line 758 of file mapDistributeBase.C.
References Foam::expressions::patchExpr::debug, and Foam::Pout.
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explicit |
Construct from my elements to send. Assumes layout is my elements.
first followed by elements from all other processors in consecutive order
Definition at line 819 of file mapDistributeBase.C.
References Pstream::exchangeSizes(), forAll, UPstream::myProcNo(), UPstream::nProcs(), List< T >::setSize(), and List< T >::transfer().
mapDistributeBase | ( | Istream & | is | ) |
Construct from Istream.
Definition at line 875 of file mapDistributeBase.C.
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staticprotected |
Definition at line 204 of file mapDistributeBase.C.
References Foam::abort(), Foam::FatalError, and FatalErrorInFunction.
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Construct per processor compact addressing of the global elements.
needed. The ones from the local processor are not included since these are always all needed.
Definition at line 299 of file mapDistributeBase.C.
References forAll, globalIndex::isLocal(), UPstream::myProcNo(), UPstream::nProcs(), globalIndex::toLocal(), globalIndex::whichProcID(), and Foam::Zero.
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Definition at line 347 of file mapDistributeBase.C.
References forAll, globalIndex::isLocal(), UPstream::myProcNo(), UPstream::nProcs(), globalIndex::toLocal(), globalIndex::whichProcID(), and Foam::Zero.
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Definition at line 401 of file mapDistributeBase.C.
References forAll, forAllIters, Foam::identity(), globalIndex::localSize(), UPstream::myProcNo(), UPstream::nProcs(), Foam::renumber(), and List< T >::setSize().
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Definition at line 482 of file mapDistributeBase.C.
References forAll, forAllIters, Foam::identity(), globalIndex::localSize(), UPstream::myProcNo(), UPstream::nProcs(), Foam::renumber(), and List< T >::setSize().
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Definition at line 38 of file mapDistributeBaseTemplates.C.
References Foam::exit(), Foam::FatalError, FatalErrorInFunction, forAll, and UList< T >::size().
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Definition at line 83 of file mapDistributeBaseTemplates.C.
References Foam::exit(), Foam::FatalError, FatalErrorInFunction, fld, and T.
Referenced by mapDistributeBase::send().
ClassName | ( | "mapDistributeBase" | ) |
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inline |
Constructed data size.
Definition at line 277 of file mapDistributeBase.H.
References mapDistributeBase::constructSize_.
Referenced by AMIInterpolation::agglomerate(), extendedFaceToCellStencil::collectData(), extendedCellToFaceStencil::collectData(), mappedPatchFieldBase< scalar >::distribute(), PatchTools::edgeNormals(), globalIndexAndTransform::globalIndexAndTransform(), globalMeshData::mergePoints(), PatchTools::pointNormals(), distributedUnallocatedDirectFieldMapper::size(), distributedUnallocatedDirectFvPatchFieldMapper::size(), distributedWeightedFvPatchFieldMapper::size(), syncTools::syncEdgeList(), syncTools::syncPointList(), and pointConstraints::syncUntransformedData().
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Constructed data size.
Definition at line 283 of file mapDistributeBase.H.
References mapDistributeBase::constructSize_.
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From subsetted data back to original data.
Definition at line 289 of file mapDistributeBase.H.
References mapDistributeBase::subMap_.
Referenced by AMIInterpolation::agglomerate(), mappedPatchFieldBase< scalar >::distribute(), refinementHistory::distribute(), distributedTriSurfaceMesh::findNearest(), distributedTriSurfaceMesh::getVolumeType(), and extendedCellToFaceStencil::writeStencilStats().
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From subsetted data back to original data.
Definition at line 295 of file mapDistributeBase.H.
References mapDistributeBase::subMap_.
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inline |
From subsetted data to new reconstructed data.
Definition at line 301 of file mapDistributeBase.H.
References mapDistributeBase::constructMap_.
Referenced by AMIInterpolation::agglomerate(), mappedPatchFieldBase< scalar >::distribute(), refinementHistory::distribute(), distributedTriSurfaceMesh::findNearest(), and distributedTriSurfaceMesh::getVolumeType().
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From subsetted data to new reconstructed data.
Definition at line 307 of file mapDistributeBase.H.
References mapDistributeBase::constructMap_.
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Does subMap include a sign.
Definition at line 313 of file mapDistributeBase.H.
References mapDistributeBase::subHasFlip_.
Referenced by distributedTriSurfaceMesh::findNearest(), and distributedTriSurfaceMesh::getVolumeType().
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Does subMap include a sign.
Definition at line 319 of file mapDistributeBase.H.
References mapDistributeBase::subHasFlip_.
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inline |
Does constructMap include a sign.
Definition at line 325 of file mapDistributeBase.H.
References mapDistributeBase::constructHasFlip_.
Referenced by distributedTriSurfaceMesh::findNearest(), and distributedTriSurfaceMesh::getVolumeType().
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Does constructMap include a sign.
Definition at line 331 of file mapDistributeBase.H.
References mapDistributeBase::constructHasFlip_.
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inline |
Definition at line 336 of file mapDistributeBase.H.
References mapDistributeBase::comm_.
Referenced by distributedTriSurfaceMesh::findNearest(), and distributedTriSurfaceMesh::getVolumeType().
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static |
Calculate a schedule. See above.
Definition at line 46 of file mapDistributeBase.C.
References forAll, HashSet< Key, Hash >::insert(), and List< T >::setSize().
const Foam::List< Foam::labelPair > & schedule | ( | ) | const |
Return a schedule. Demand driven. See above.
Definition at line 187 of file mapDistributeBase.C.
References mapDistributeBase::comm_, mapDistributeBase::constructMap_, UPstream::msgType(), mapDistributeBase::schedulePtr_, and mapDistributeBase::subMap_.
void transfer | ( | mapDistributeBase & | rhs | ) |
Transfer the contents of the argument and annul the argument.
Definition at line 883 of file mapDistributeBase.C.
References mapDistributeBase::comm_, mapDistributeBase::constructHasFlip_, mapDistributeBase::constructMap_, mapDistributeBase::constructSize_, mapDistributeBase::subHasFlip_, and mapDistributeBase::subMap_.
Referenced by mapDistributeBase::mapDistributeBase(), and mapDistribute::transfer().
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Helper for construct from globalIndex. Renumbers element.
(in globalIndex numbering) into compact indices.
Definition at line 906 of file mapDistributeBase.C.
References globalIndex::isLocal(), globalIndex::toLocal(), and globalIndex::whichProcID().
void compact | ( | const boolList & | elemIsUsed, |
const int | tag = UPstream::msgType() |
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) |
Compact maps. Gets per field a bool whether it is used (locally)
and works out itself what this side and sender side can remove from maps. Only compacts non-local elements (i.e. the stuff that gets sent over), does not change the local layout
Definition at line 930 of file mapDistributeBase.C.
References UPstream::allProcs(), forAll, Foam::mag(), Foam::max(), UPstream::myProcNo(), UPstream::nonBlocking, UPstream::nProcs(), UPstream::nRequests(), UPstream::parRun(), UIPstream::read(), List< T >::setSize(), UPstream::waitRequests(), and UOPstream::write().
void compact | ( | const boolList & | elemIsUsed, |
const label | localSize, | ||
labelList & | oldToNewSub, | ||
labelList & | oldToNewConstruct, | ||
const int | tag = UPstream::msgType() |
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) |
Compact all maps and layout. Returns compaction maps for.
subMap and constructMap
Definition at line 1099 of file mapDistributeBase.C.
References UPstream::allProcs(), forAll, Foam::mag(), UPstream::myProcNo(), UPstream::nonBlocking, UPstream::nProcs(), UPstream::nRequests(), UPstream::parRun(), UIPstream::read(), List< T >::setSize(), Foam::sign(), UPstream::waitRequests(), and UOPstream::write().
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Distribute data. Note:schedule only used for.
Pstream::commsTypes::scheduled for now, all others just use send-to-all, receive-from-all.
Definition at line 122 of file mapDistributeBaseTemplates.C.
References Foam::abort(), Foam::FatalError, FatalErrorInFunction, field(), PstreamBuffers::finishedSends(), forAll, Foam::blockMeshTools::read(), List< T >::setSize(), and Foam::vtk::write().
Referenced by Field< Foam::Vector2D >::autoMap(), faceAreaWeightAMI::calculate(), mapDistribute::distribute(), mappedPatchBase::distribute(), distributedTriSurfaceMesh::findNearest(), distributedTriSurfaceMesh::getVolumeType(), Field< Foam::Vector2D >::map(), mappedPatchBase::reverseDistribute(), and streamLineBase::writeToFile().
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Distribute data. If multiple processors writing to same.
position adds contributions using cop.
Definition at line 654 of file mapDistributeBaseTemplates.C.
References Foam::abort(), Foam::FatalError, FatalErrorInFunction, field(), PstreamBuffers::finishedSends(), forAll, Foam::blockMeshTools::read(), List< T >::setSize(), and Foam::vtk::write().
void distribute | ( | List< T > & | fld, |
const int | tag = UPstream::msgType() |
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) | const |
Distribute data using default commsType.
Definition at line 1314 of file mapDistributeBaseTemplates.C.
References fld.
void distribute | ( | List< T > & | fld, |
const negateOp & | negOp, | ||
const int | tag = UPstream::msgType() |
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) | const |
Distribute data using default commsType.
Definition at line 1251 of file mapDistributeBaseTemplates.C.
References UPstream::blocking, UPstream::defaultCommsType, fld, UPstream::nonBlocking, and UPstream::scheduled.
void distribute | ( | DynamicList< T > & | fld, |
const int | tag = UPstream::msgType() |
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) | const |
Distribute data using default commsType.
Definition at line 1326 of file mapDistributeBaseTemplates.C.
References fld.
void reverseDistribute | ( | const label | constructSize, |
List< T > & | fld, | ||
const int | tag = UPstream::msgType() |
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) | const |
Reverse distribute data using default commsType.
Definition at line 1344 of file mapDistributeBaseTemplates.C.
References UPstream::blocking, UPstream::defaultCommsType, fld, UPstream::nonBlocking, and UPstream::scheduled.
Referenced by mapDistribute::reverseDistribute().
void reverseDistribute | ( | const label | constructSize, |
const T & | nullValue, | ||
List< T > & | fld, | ||
const int | tag = UPstream::msgType() |
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) | const |
Reverse distribute data using default commsType.
Since constructSize might be larger than supplied size supply a nullValue
Definition at line 1409 of file mapDistributeBaseTemplates.C.
References UPstream::blocking, UPstream::defaultCommsType, fld, UPstream::nonBlocking, and UPstream::scheduled.
void send | ( | PstreamBuffers & | pBufs, |
const List< T > & | field | ||
) | const |
Do all sends using PstreamBuffers.
Definition at line 1176 of file mapDistributeBaseTemplates.C.
References mapDistributeBase::accessAndFlip(), UPstream::allProcs(), mapDistributeBase::comm_, field(), PstreamBuffers::finishedSends(), forAll, mapDistributeBase::subHasFlip_, and mapDistributeBase::subMap_.
void receive | ( | PstreamBuffers & | pBufs, |
List< T > & | field | ||
) | const |
Do all receives using PstreamBuffers.
Definition at line 1210 of file mapDistributeBaseTemplates.C.
References Foam::abort(), UPstream::allProcs(), Foam::FatalError, FatalErrorInFunction, and field().
void printLayout | ( | Ostream & | os | ) | const |
Debug: print layout. Can only be used on maps with sorted.
storage (local data first, then non-local data)
Definition at line 221 of file mapDistributeBase.C.
References Foam::abort(), Foam::endl(), Foam::FatalError, FatalErrorInFunction, forAll, Foam::labelMax, Foam::labelMin, Foam::mag(), Foam::max(), Foam::min(), UPstream::myProcNo(), UPstream::nProcs(), and os().
Referenced by mapDistribute::printLayout().
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Correct for topo change.
Definition at line 486 of file mapDistributeBase.H.
References NotImplemented.
void operator= | ( | const mapDistributeBase & | rhs | ) |
Copy assignment.
Definition at line 1327 of file mapDistributeBase.C.
References mapDistributeBase::comm_, mapDistributeBase::constructHasFlip_, mapDistributeBase::constructMap_, mapDistributeBase::constructSize_, mapDistributeBase::subHasFlip_, and mapDistributeBase::subMap_.
Referenced by mapDistribute::operator=().
void operator= | ( | mapDistributeBase && | rhs | ) |
Move assignment.
Definition at line 1344 of file mapDistributeBase.C.
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Read dictionary from Istream.
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Write dictionary to Ostream.
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Size of reconstructed data.
Definition at line 110 of file mapDistributeBase.H.
Referenced by mapDistributeBase::constructSize(), Foam::operator<<(), mapDistributeBase::operator=(), Foam::operator>>(), and mapDistributeBase::transfer().
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Maps from subsetted data back to original data.
Definition at line 113 of file mapDistributeBase.H.
Referenced by Foam::operator<<(), mapDistributeBase::operator=(), Foam::operator>>(), mapDistributeBase::schedule(), mapDistributeBase::send(), mapDistributeBase::subMap(), and mapDistributeBase::transfer().
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Maps from subsetted data to new reconstructed data.
Definition at line 116 of file mapDistributeBase.H.
Referenced by mapDistributeBase::constructMap(), Foam::operator<<(), mapDistributeBase::operator=(), Foam::operator>>(), mapDistributeBase::schedule(), and mapDistributeBase::transfer().
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Whether subMap includes flip or not.
Definition at line 119 of file mapDistributeBase.H.
Referenced by Foam::operator<<(), mapDistributeBase::operator=(), Foam::operator>>(), mapDistributeBase::send(), mapDistributeBase::subHasFlip(), and mapDistributeBase::transfer().
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Whether constructMap includes flip or not.
Definition at line 122 of file mapDistributeBase.H.
Referenced by mapDistributeBase::constructHasFlip(), Foam::operator<<(), mapDistributeBase::operator=(), Foam::operator>>(), and mapDistributeBase::transfer().
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Communicator to use for parallel operations.
Definition at line 125 of file mapDistributeBase.H.
Referenced by mapDistributeBase::comm(), Foam::operator<<(), mapDistributeBase::operator=(), Foam::operator>>(), mapDistributeBase::schedule(), mapDistributeBase::send(), and mapDistributeBase::transfer().
Schedule.
Definition at line 128 of file mapDistributeBase.H.
Referenced by mapDistributeBase::schedule().