Marching tet iso surface algorithm with optional filtering to keep only points originating from mesh edges. More...
Public Member Functions | |
| TypeName ("isoSurfaceTopo") | |
| Runtime type information. More... | |
| isoSurfaceTopo (const polyMesh &mesh, const scalarField &cellValues, const scalarField &pointValues, const scalar iso, const isoSurfaceParams ¶ms=isoSurfaceParams(), const bitSet &ignoreCells=bitSet()) | |
| Construct from cell and point values. More... | |
| virtual | ~isoSurfaceTopo ()=default |
| Destructor. More... | |
| const edgeList & | pointToVerts () const noexcept |
| Per point: originating mesh vertex/cell centre combination. More... | |
| virtual tmp< Field< scalar > > | interpolate (const VolumeField< scalar > &cellValues, const Field< scalar > &pointValues) const |
| interpolate scalar cellValues, pointValues on iso-surface More... | |
| virtual tmp< Field< vector > > | interpolate (const VolumeField< vector > &cellValues, const Field< vector > &pointValues) const |
| interpolate vector cellValues, pointValues on iso-surface More... | |
| virtual tmp< Field< sphericalTensor > > | interpolate (const VolumeField< sphericalTensor > &cellValues, const Field< sphericalTensor > &pointValues) const |
| interpolate sphericalTensor cellValues, pointValues on iso-surface More... | |
| virtual tmp< Field< symmTensor > > | interpolate (const VolumeField< symmTensor > &cellValues, const Field< symmTensor > &pointValues) const |
| interpolate symmTensor cellValues, pointValues on iso-surface More... | |
| virtual tmp< Field< tensor > > | interpolate (const VolumeField< tensor > &cellValues, const Field< tensor > &pointValues) const |
| interpolate tensor cellValues, pointValues on iso-surface More... | |
| template<class Type > | |
| Foam::tmp< Foam::Field< Type > > | interpolateTemplate (const Field< Type > &cellData, const Field< Type > &pointData) const |
 Public Member Functions inherited from isoSurfaceBase | |
| isoSurfaceBase (const polyMesh &mesh, const scalarField &cellValues, const scalarField &pointValues, const scalar iso, const isoSurfaceParams ¶ms=isoSurfaceParams()) | |
| Construct with mesh, cell/point values and iso-value. More... | |
| const polyMesh & | mesh () const noexcept |
| The mesh for which the iso-surface is associated. More... | |
| const scalarField & | cellValues () const noexcept |
| The mesh cell values used for creating the iso-surface. More... | |
| const scalarField & | pointValues () const noexcept |
| The mesh point values used for creating the iso-surface. More... | |
| scalar | isoValue () const noexcept |
| The iso-value associated with the surface. More... | |
| const labelList & | meshCells () const noexcept |
| For each face, the original cell in mesh. More... | |
| labelList & | meshCells () noexcept |
| For each face, the original cell in mesh. More... | |
| label | blockCells (UList< cutType > &cuts, const bitSet &ignoreCells) const |
| Mark ignoreCells as BLOCKED. More... | |
| label | blockCells (UList< cutType > &cuts, const boundBox &bb, const volumeType::type volType) const |
| Mark cells inside/outside a (valid) bound box as BLOCKED. More... | |
| void | ignoreCyclics () |
| Set ignoreBoundaryFaces to ignore cyclics (cyclicACMI) More... | |
| label | calcCellCuts (List< cutType > &cuts) const |
| Populate a list of candidate cell cuts using getCellCutType() More... | |
| cutType | getFaceCutType (const label facei) const |
| Determine face cut for an individual face. More... | |
| cutType | getCellCutType (const label celli) const |
| virtual tmp< Field< scalar > > | interpolate (const VolumeField< scalar > &cellValues, const Field< scalar > &pointValues) const |
| interpolate scalar cellValues, pointValues on iso-surface More... | |
| virtual tmp< Field< vector > > | interpolate (const VolumeField< vector > &cellValues, const Field< vector > &pointValues) const |
| interpolate vector cellValues, pointValues on iso-surface More... | |
| virtual tmp< Field< sphericalTensor > > | interpolate (const VolumeField< sphericalTensor > &cellValues, const Field< sphericalTensor > &pointValues) const |
| interpolate sphericalTensor cellValues, pointValues on iso-surface More... | |
| virtual tmp< Field< symmTensor > > | interpolate (const VolumeField< symmTensor > &cellValues, const Field< symmTensor > &pointValues) const |
| interpolate symmTensor cellValues, pointValues on iso-surface More... | |
| virtual tmp< Field< tensor > > | interpolate (const VolumeField< tensor > &cellValues, const Field< tensor > &pointValues) const |
| interpolate tensor cellValues, pointValues on iso-surface More... | |
| Public Member Functions inherited from MeshedSurface< face > | |
| MeshedSurface () | |
| Default construct, an empty surface. More... | |
| MeshedSurface (const MeshedSurface &surf) | |
| Copy construct. More... | |
| MeshedSurface (const UnsortedMeshedSurface< face > &surf) | |
| Copy construct from an UnsortedMeshedSurface. More... | |
| MeshedSurface (MeshedSurface &&surf) | |
| Move construct. More... | |
| MeshedSurface (UnsortedMeshedSurface< face > &&surf) | |
| Move construct from an UnsortedMeshedSurface. More... | |
| MeshedSurface (const pointField &pointLst, const UList< face > &faceLst, const UList< surfZone > &zoneLst) | |
| Copy construct from components (points, faces, zones). More... | |
| MeshedSurface (pointField &&pointLst, List< face > &&faceLst, const UList< surfZone > &zoneLst) | |
| Move construct from components (points, faces). More... | |
| MeshedSurface (const pointField &pointLst, const UList< face > &faceLst, const labelUList &zoneSizes=labelUList(), const UList< word > &zoneNames=UList< word >()) | |
| Copy construct from components (points, faces). More... | |
| MeshedSurface (pointField &&pointLst, List< face > &&faceLst, const labelUList &zoneSizes=labelUList(), const UList< word > &zoneNames=UList< word >()) | |
| Move construct from components (points, faces). More... | |
| MeshedSurface (const polyBoundaryMesh &bMesh, const bool globalPoints=false) | |
| Construct from a boundary mesh with local points/faces. More... | |
| MeshedSurface (const surfMesh &mesh) | |
| Construct from a surfMesh. More... | |
| MeshedSurface (const fileName &name) | |
| Construct from file name (uses extension to determine type) More... | |
| MeshedSurface (const fileName &name, const word &fileType) | |
| Construct from file name and given file type. More... | |
| MeshedSurface (Istream &is) | |
| Construct from Istream. More... | |
| MeshedSurface (const Time &runTime) | |
| Construct from database (as surfMesh) with default name. More... | |
| MeshedSurface (const Time &runTime, const word &surfName) | |
| Construct from database (as surfMesh) with given surface name. More... | |
| MeshedSurface (const IOobject &io, const dictionary &dict, const bool isGlobal=true) | |
| Read construct using IO to find the file location. More... | |
| MeshedSurface (const MeshedSurface< face > &surf) | |
| MeshedSurface (MeshedSurface< face > &&surf) | |
| bool | read (const fileName &name, const word &fileType) |
| Read from file. Chooses reader based on explicit extension. More... | |
| virtual bool | read (const fileName &name) |
| Read from file. Chooses reader based on detected extension. More... | |
| virtual void | write (const fileName &name, IOstreamOption streamOpt=IOstreamOption(), const dictionary &options=dictionary::null) const |
| Generic write routine. Chooses writer based on extension. More... | |
| virtual void | write (const fileName &name, const word &fileType, IOstreamOption streamOpt=IOstreamOption(), const dictionary &options=dictionary::null) const |
| Generic write routine for given format type. More... | |
| void | write (const Time &runTime, const word &surfName=word::null) const |
| Write to database. More... | |
| ClassName ("MeshedSurface") | |
| Declare type-name (with debug switch) More... | |
| declareRunTimeSelectionTable (autoPtr, MeshedSurface, fileExtension,(const fileName &name),(name)) | |
| virtual | ~MeshedSurface () |
| Destructor. More... | |
| declareMemberFunctionSelectionTable (void, UnsortedMeshedSurface, write, fileExtension,(const fileName &name, const MeshedSurface< face > &surf, IOstreamOption streamOpt, const dictionary &options),(name, surf, streamOpt, options)) | |
| label | size () const |
| The surface size is the number of faces. More... | |
| const List< face > & | surfFaces () const |
| Return const access to the faces. More... | |
| const labelList & | faceIds () const |
| Return const access to faces ids. More... | |
| const surfZoneList & | surfZones () const |
| Const access to the surface zones. More... | |
| const vectorField & | Sf () const |
| Face area vectors (normals) More... | |
| const scalarField & | magSf () const |
| Face area magnitudes. More... | |
| const vectorField & | Cf () const |
| Face centres. More... | |
| virtual void | clear () |
| Clear all storage. More... | |
| virtual void | addZones (const UList< surfZone > &, const bool cullEmpty=false) |
| Add surface zones. More... | |
| virtual void | addZones (const labelUList &sizes, const UList< word > &names, const bool cullEmpty=false) |
| Add surface zones. More... | |
| virtual void | addZones (const labelUList &sizes, const bool cullEmpty=false) |
| Add surface zones. More... | |
| bool | addZonesToFaces () |
| Propagate zone information on face regions. More... | |
| bool | addZonesToFaces () |
| Specialization for labelledTri. More... | |
| bool | addZonesToFaces () |
| virtual void | removeZones () |
| Remove surface zones. More... | |
| virtual void | movePoints (const pointField &newPoints) |
| Move points. More... | |
| virtual void | scalePoints (const scalar scaleFactor) |
| Scale points. A non-positive factor is ignored. More... | |
| virtual void | cleanup (const bool verbose) |
| Remove invalid faces. More... | |
| virtual void | compactPoints (labelList &pointMap=const_cast< labelList & >(labelList::null())) |
| Remove unused points and renumber faces in local visit order. More... | |
| virtual bool | stitchFaces (const scalar tol=SMALL, const bool verbose=false) |
| virtual bool | checkFaces (const bool verbose=false) |
| virtual label | nTriangles () const |
| Count number of triangles. More... | |
| virtual label | nTriangles (labelList &faceMap) const |
| Count number of triangles, returning a face map of original ids. More... | |
| virtual label | triangulate () |
| Triangulate in-place, returning the number of triangles added. More... | |
| virtual label | triangulate (labelList &faceMap) |
| Triangulate in-place, returning the number of triangles added. More... | |
| void | subsetMeshMap (const BoolListType &include, labelList &pointMap, labelList &faceMap) const |
| Create mappings for a sub-surface. More... | |
| MeshedSurface | subsetMesh (const UList< bool > &include, labelList &pointMap, labelList &faceMap) const |
| Return a new surface subsetted on the selected faces. More... | |
| MeshedSurface | subsetMesh (const bitSet &include, labelList &pointMap, labelList &faceMap) const |
| Return a new surface subsetted on the selected faces. More... | |
| MeshedSurface | subsetMesh (const UList< bool > &include) const |
| Return a new surface subsetted on the selected faces. More... | |
| MeshedSurface | subsetMesh (const bitSet &include) const |
| Return a new surface subsetted on the selected faces. More... | |
| MeshedSurface | subsetMesh (const wordRes &includeNames, const wordRes &excludeNames=wordRes()) const |
| Return a new surface subsetted on the selected zone names. More... | |
| void | swap (MeshedSurface< face > &surf) |
| Swap contents. More... | |
| void | transfer (pointField &pointLst, List< face > &faceLst) |
| Transfer the components. More... | |
| void | transfer (MeshedSurface< face > &surf) |
| Transfer the contents of the argument and annul the argument. More... | |
| void | transfer (UnsortedMeshedSurface< face > &surf) |
| Transfer the contents of the argument and annul the argument. More... | |
| autoPtr< MeshedSurface< face > > | releaseGeom () |
| Release (clear) geometry and return for reuse. More... | |
| void | swapFaces (List< face > &faces) |
| Swap the stored faces. Use with caution. More... | |
| void | swapPoints (pointField &points) |
| Swap the stored points. More... | |
| void | writeStats (Ostream &os) const |
| void | operator= (const MeshedSurface< face > &surf) |
| Copy assignment. More... | |
| void | operator= (MeshedSurface< face > &&surf) |
| Move assignment. More... | |
| operator MeshedSurfaceProxy< face > () const | |
| Conversion operator to MeshedSurfaceProxy. More... | |
| Public Member Functions inherited from PrimitivePatch< FaceList, PointField > | |
| PrimitivePatch (const FaceList &faces, const PointField &points) | |
| Construct from components. More... | |
| PrimitivePatch (FaceList &&faces, const PointField &points) | |
| Construct from components, transferring faces. More... | |
| PrimitivePatch (FaceList &faces, PointField &points, const bool reuse) | |
| Construct from components, reuse storage. More... | |
| PrimitivePatch (const PrimitivePatch< FaceList, PointField > &pp) | |
| Copy construct. More... | |
| virtual | ~PrimitivePatch () |
| Destructor. More... | |
| void | clearOut () |
| void | clearGeom () |
| void | clearTopology () |
| void | clearPatchMeshAddr () |
| void | swap (PrimitivePatch &)=delete |
| Suppress direct swapping, since storage containers may be const. More... | |
| const Field< point_type > & | points () const noexcept |
| Return reference to global points. More... | |
| label | nFaces () const noexcept |
| Number of faces in the patch. More... | |
| label | nPoints () const |
| Number of points supporting patch faces. More... | |
| label | nEdges () const |
| Number of edges in patch. More... | |
| const edgeList & | edges () const |
| Return list of edges, address into LOCAL point list. More... | |
| const edgeList::subList | internalEdges () const |
| Return sub-list of internal edges, address into LOCAL point list. More... | |
| const edgeList::subList | boundaryEdges () const |
| Return sub-list of boundary edges, address into LOCAL point list. More... | |
| label | nInternalEdges () const |
| Number of internal edges. More... | |
| label | nBoundaryEdges () const |
| Number of boundary edges == (nEdges() - nInternalEdges()) More... | |
| bool | isInternalEdge (const label edgei) const |
| Is internal edge? More... | |
| const labelList & | boundaryPoints () const |
| Return list of boundary points, address into LOCAL point list. More... | |
| const labelListList & | faceFaces () const |
| Return face-face addressing. More... | |
| const labelListList & | edgeFaces () const |
| Return edge-face addressing. More... | |
| const labelListList & | faceEdges () const |
| Return face-edge addressing. More... | |
| const labelListList & | pointEdges () const |
| Return point-edge addressing. More... | |
| const labelListList & | pointFaces () const |
| Return point-face addressing. More... | |
| const List< face_type > & | localFaces () const |
| Return patch faces addressing into local point list. More... | |
| labelList | boundaryFaces () const |
| labelList | uniqBoundaryFaces () const |
| const labelList & | meshPoints () const |
| Return labelList of mesh points in patch. More... | |
| const Map< label > & | meshPointMap () const |
| Mesh point map. More... | |
| const Field< point_type > & | localPoints () const |
| Return pointField of points in patch. More... | |
| const labelList & | localPointOrder () const |
| Return orders the local points for most efficient search. More... | |
| label | whichPoint (const label gp) const |
| Given a global point index, return the local point index. More... | |
| edge | meshEdge (const label edgei) const |
| From patch edge to global edge using meshPoints. More... | |
| edge | meshEdge (const edge &e) const |
| From patch edge to global edge using meshPoints. More... | |
| label | findEdge (const edge &e) const |
| labelList | meshEdges (const edgeList &allEdges, const labelListList &cellEdges, const labelList &faceCells) const |
| labelList | meshEdges (const edgeList &allEdges, const labelListList &pointEdges) const |
| label | meshEdge (const label edgei, const edgeList &allEdges, const labelListList &pointEdges) const |
| labelList | meshEdges (const labelUList &edgeLabels, const edgeList &allEdges, const labelListList &pointEdges) const |
| const Field< point_type > & | faceCentres () const |
| Return face centres for patch. More... | |
| const Field< point_type > & | faceAreas () const |
| Return face area vectors for patch. More... | |
| const Field< scalar > & | magFaceAreas () const |
| Return face area magnitudes for patch. More... | |
| const Field< point_type > & | faceNormals () const |
| Return face unit normals for patch. More... | |
| const Field< point_type > & | pointNormals () const |
| Return point normals for patch. More... | |
| bool | hasFaceAreas () const |
| bool | hasFaceCentres () const |
| bool | hasFaceNormals () const |
| bool | hasPointNormals () const |
| bool | hasBoundaryPoints () const |
| bool | hasEdges () const |
| bool | hasFaceFaces () const |
| bool | hasEdgeFaces () const |
| bool | hasFaceEdges () const |
| bool | hasPointEdges () const |
| bool | hasPointFaces () const |
| bool | hasMeshPointMap () const |
| template<class ToPatch > | |
| List< objectHit > | projectPoints (const ToPatch &targetPatch, const Field< point_type > &projectionDirection, const intersection::algorithm=intersection::FULL_RAY, const intersection::direction=intersection::VECTOR) const |
| Project vertices of patch onto another patch. More... | |
| template<class ToPatch > | |
| List< objectHit > | projectFaceCentres (const ToPatch &targetPatch, const Field< point_type > &projectionDirection, const intersection::algorithm=intersection::FULL_RAY, const intersection::direction=intersection::VECTOR) const |
| Project vertices of patch onto another patch. More... | |
| const labelListList & | edgeLoops () const |
| Return list of closed loops of boundary vertices. More... | |
| surfaceTopo | surfaceType () const |
| Calculate surface type formed by patch. More... | |
| bool | checkTopology (const bool report=false, labelHashSet *setPtr=nullptr) const |
| Check surface formed by patch for manifoldness (see above). More... | |
| bool | checkPointManifold (const bool report=false, labelHashSet *setPtr=nullptr) const |
| Checks primitivePatch for faces sharing point but not edge. More... | |
| virtual void | movePoints (const Field< point_type > &) |
| Correct patch after moving points. More... | |
| void | operator= (const PrimitivePatch< FaceList, PointField > &rhs) |
| Copy assign faces. Leave points alone (could be a reference). More... | |
| void | operator= (PrimitivePatch< FaceList, PointField > &&rhs) |
| Move assign faces. Leave points alone (could be a reference). More... | |
| label | whichEdge (const edge &e) const |
| Identical to findEdge. More... | |
| template<class ToPatch > | |
| Foam::List< Foam::objectHit > | projectPoints (const ToPatch &targetPatch, const Field< typename Foam::PrimitivePatch< FaceList, PointField >::point_type > &projectionDirection, const intersection::algorithm alg, const intersection::direction dir) const |
| template<class ToPatch > | |
| Foam::List< Foam::objectHit > | projectFaceCentres (const ToPatch &targetPatch, const Field< typename Foam::PrimitivePatch< FaceList, PointField >::point_type > &projectionDirection, const intersection::algorithm alg, const intersection::direction dir) const |
| Public Member Functions inherited from PrimitivePatchBase | |
| ClassName ("PrimitivePatch") | |
| Runtime type information. More... | |
| PrimitivePatchBase ()=default | |
| Default construct. More... | |
| Public Member Functions inherited from surfaceFormatsCore | |
| surfaceFormatsCore ()=default | |
| Default construct. More... | |
| virtual | ~surfaceFormatsCore ()=default |
| Destructor. More... | |
| Public Member Functions inherited from isoSurfaceParams | |
| isoSurfaceParams (const algorithmType algo=algorithmType::ALGO_DEFAULT, const filterType filter=filterType::DIAGCELL) noexcept | |
| Default construct, or with specified algorithm. More... | |
| isoSurfaceParams (const dictionary &dict, const isoSurfaceParams ¶ms=isoSurfaceParams()) | |
| Default construct, setting parameters from dictionary. More... | |
| isoSurfaceParams (const dictionary &dict, const algorithmType algo, const filterType filter=filterType::DIAGCELL) | |
| Default construct, setting parameters from dictionary. More... | |
| algorithmType | algorithm () const noexcept |
| Get current algorithm. More... | |
| void | algorithm (algorithmType algo) noexcept |
| Set algorithm. More... | |
| filterType | filter () const noexcept |
| Get current filter type. More... | |
| void | filter (filterType fltr) noexcept |
| Set filter type. More... | |
| bool | snap () const noexcept |
| Get point snapping flag. More... | |
| void | snap (bool on) noexcept |
| Set point snapping flag. More... | |
| scalar | mergeTol () const noexcept |
| Get current merge tolerance. More... | |
| void | mergeTol (const scalar relTol) noexcept |
| Set merge tolerance (cell/point algo) More... | |
| const boundBox & | getClipBounds () const noexcept |
| Get optional clipping bounding box. More... | |
| boundBox & | getClipBounds () noexcept |
| Access optional clipping bounding box. More... | |
| void | setClipBounds (const boundBox &bb) |
| Set optional clipping bounding box. More... | |
| void | print (Ostream &os) const |
| Print information about the settings. More... | |
Protected Member Functions | |
| void | inplaceSubsetMesh (const bitSet &include) |
| Subset the surface using the selected faces. More... | |
| template<class Type > | |
| tmp< Field< Type > > | interpolateTemplate (const Field< Type > &cellData, const Field< Type > &pointData) const |
| Interpolates cellData and pointData fields. More... | |
| Protected Member Functions inherited from isoSurfaceBase | |
| template<class Type > | |
| tmp< Field< Type > > | interpolateTemplate (const VolumeField< Type > &cellValues, const Field< Type > &pointValues) const |
| Dummy templated interpolate method. More... | |
| isoSurfaceBase (const isoSurfaceBase &)=delete | |
| No copy construct. More... | |
| void | operator= (const isoSurfaceBase &)=delete |
| No copy assignment. More... | |
| Protected Member Functions inherited from MeshedSurface< face > | |
| void | transcribe (MeshedSurface< face > &surf) |
| Transfer points/zones from 'face' to other other shapes. More... | |
| void | transcribe (MeshedSurface< face > &surf) |
| void | transcribe (MeshedSurface< face > &surf) |
| void | transcribe (MeshedSurface< face > &surf) |
| void | checkZones (const bool verbose=true) |
| Sanity check/resizing on zones. More... | |
| pointField & | storedPoints () |
| Non-const access to global points. More... | |
| List< face > & | storedFaces () |
| Non-const access to the faces. More... | |
| labelList & | storedFaceIds () |
| Non-const access to face ids. More... | |
| surfZoneList & | storedZones () |
| Non-const access to the zones. More... | |
| void | sortFacesAndStore (DynamicList< face > &unsortedFaces, DynamicList< label > &zoneIds, DynamicList< label > &elemIds, bool sorted) |
| Sort faces by zones and store sorted faces. More... | |
| virtual void | remapFaces (const labelUList &faceMapNewToOld) |
| Set new zones from faceMap. More... | |
Additional Inherited Members | |
| Public Types inherited from isoSurfaceBase | |
| enum | cutType : uint8_t { NOTCUT = 0 , CUT = 0x1 , TETCUT = 0x2 , SPHERE = 0x4 , ANYCUT = 0xF , UNVISITED = 0x10 , BLOCKED = 0x20 , SPECIAL = 0xF0 } |
| The type of cell/face cuts. More... | |
| enum | algorithmType |
| The algorithm types. More... | |
| enum class | filterType |
| The filtering (regularization) to apply. More... | |
| Public Types inherited from MeshedSurface< face > | |
| typedef face | face_type |
| The face type (same as the underlying PrimitivePatch) More... | |
| typedef point | point_type |
| The point type (same as the underlying PrimitivePatch) More... | |
| Public Types inherited from PrimitivePatch< FaceList, PointField > | |
| enum | surfaceTopo { MANIFOLD , OPEN , ILLEGAL } |
| Enumeration defining the surface type. Used in check routines. More... | |
| typedef std::remove_reference< FaceList >::type::value_type | face_type |
| The face type. More... | |
| typedef std::remove_reference< PointField >::type::value_type | point_type |
| The point type. More... | |
| typedef FaceList | FaceListType |
| The face list type. More... | |
| typedef PointField | PointFieldType |
| The point field type. More... | |
| typedef face_type | FaceType |
| Deprecated(2020-03) prefer face_type typedef. More... | |
| Public Types inherited from isoSurfaceParams | |
| enum | algorithmType : uint8_t { ALGO_DEFAULT = 0 , ALGO_TOPO , ALGO_CELL , ALGO_POINT } |
| The algorithm types. More... | |
| enum class | filterType : uint8_t { NONE = 0 , CELL , DIAGCELL , NONMANIFOLD , PARTIAL = CELL , FULL = DIAGCELL , CLEAN = NONMANIFOLD } |
| The filtering (regularization) to apply. More... | |
| Static Public Member Functions inherited from isoSurfaceBase | |
| static autoPtr< isoSurfaceBase > | New (const isoSurfaceParams ¶ms, const volScalarField &cellValues, const scalarField &pointValues, const scalar iso, const bitSet &ignoreCells=bitSet()) |
| Create for specified algorithm type. More... | |
| static void | resetCuts (UList< cutType > &cuts) |
| Restore non-BLOCKED state to an UNVISITED state. More... | |
| Static Public Member Functions inherited from MeshedSurface< face > | |
| static void | write (const fileName &name, const MeshedSurface< face > &surf, IOstreamOption streamOpt=IOstreamOption(), const dictionary &options=dictionary::null) |
| Write to file, selecting writer based on its extension. More... | |
| static void | write (const fileName &name, const word &fileType, const MeshedSurface< face > &surf, IOstreamOption streamOpt=IOstreamOption(), const dictionary &options=dictionary::null) |
| Write to file, selecting writer based on the given extension. More... | |
| static wordHashSet | readTypes () |
| Known readable file-types, without friends or proxies. More... | |
| static wordHashSet | writeTypes () |
| Known writable file-types, without friends or proxies. More... | |
| static bool | canReadType (const word &fileType, bool verbose=false) |
| Can we read this file format? Also checks friend types. More... | |
| static bool | canWriteType (const word &fileType, bool verbose=false) |
| Can we write this file format? Also checks proxy types. More... | |
| static bool | canRead (const fileName &name, bool verbose=false) |
| Can we read this file format? More... | |
| static autoPtr< MeshedSurface > | New (const fileName &name, const word &fileType, bool mandatory=true) |
| Read construct from filename with given file type. More... | |
| static autoPtr< MeshedSurface > | New (const fileName &name) |
| Read construct from filename (file type implicit from extension) More... | |
| Static Public Member Functions inherited from surfaceFormatsCore | |
| static bool | checkSupport (const wordHashSet &available, const word &fileType, const bool verbose=false, const char *functionName=nullptr) |
| Verbose checking of fileType in the list of available types. More... | |
| static fileName | findFile (const IOobject &io, const bool isGlobal=true) |
| static fileName | findFile (const IOobject &io, const dictionary &dict, const bool isGlobal=true) |
| Static Public Member Functions inherited from isoSurfaceParams | |
| static algorithmType | getAlgorithmType (const dictionary &dict, const algorithmType deflt) |
| Get 'isoMethod' or 'isoAlgorithm' as enumeration. More... | |
| static filterType | getFilterType (const dictionary &dict, const filterType deflt) |
| Get 'regularise' as bool or enumeration. More... | |
| Static Public Attributes inherited from surfaceFormatsCore | |
| static word | nativeExt |
| The file extension corresponding to 'native' surface format. More... | |
| Static Public Attributes inherited from isoSurfaceParams | |
| static const Enum< algorithmType > | algorithmNames |
| Names for the iso-surface algorithms. More... | |
| static const Enum< filterType > | filterNames |
| Names for the filtering types. More... | |
| Protected Types inherited from isoSurfaceBase | |
| typedef meshedSurface | Mesh |
| typedef cutType | cellCutType |
| Static Protected Member Functions inherited from isoSurfaceBase | |
| static label | countCutType (const UList< cutType > &cuts, const uint8_t maskValue) |
| Count the number of cuts matching the mask type. More... | |
| Static Protected Member Functions inherited from surfaceFormatsCore | |
| static string | getLineNoComment (ISstream &is, const char comment='#') |
| Read non-empty and non-comment line. More... | |
| template<class Container > | |
| static List< surfZone > | oneZone (const Container &container, const word &name="zone0") |
| static labelList | getSelectedPatches (const surfZoneList &patches, const wordRes &allow, const wordRes &deny=wordRes()) |
| Return ids for zone/patch that match by name. More... | |
| static fileName | relativeFilePath (const IOobject &io, const fileName &f, const bool isGlobal=true) |
| Return fileName. More... | |
| static fileName | checkFile (const IOobject &io, const bool isGlobal=true) |
| Return fileName to load IOobject from. More... | |
| static fileName | checkFile (const IOobject &io, const dictionary &dict, const bool isGlobal=true) |
| Return fileName to load IOobject from. More... | |
| Protected Attributes inherited from isoSurfaceBase | |
| const polyMesh & | mesh_ |
| Reference to mesh. More... | |
| const scalarField & | cVals_ |
| Cell values. More... | |
| const scalarField & | pVals_ |
| Point values. More... | |
| const scalar | iso_ |
| Iso value. More... | |
| bitSet | ignoreBoundaryFaces_ |
| Optional boundary faces to ignore. More... | |
| labelList | meshCells_ |
| For every face, the original cell in mesh. More... | |
Marching tet iso surface algorithm with optional filtering to keep only points originating from mesh edges.
Definition at line 59 of file isoSurfaceTopo.H.
| isoSurfaceTopo | ( | const polyMesh & | mesh, |
| const scalarField & | cellValues, | ||
| const scalarField & | pointValues, | ||
| const scalar | iso, | ||
| const isoSurfaceParams & | params = isoSurfaceParams(), |
||
| const bitSet & | ignoreCells = bitSet() |
||
| ) |
Construct from cell and point values.
| ignoreCells | cells to ignore in the cellValues |
Control parameters include
Definition at line 908 of file isoSurfaceTopo.C.
References vtuCells::addPointCellLabels(), polyMeshTetDecomposition::adjustTetBasePtIs(), isoSurfaceBase::ANYCUT, internalMeshWriter::beginPointData(), isoSurfaceBase::blockCells(), isoSurfaceBase::BLOCKED, polyMesh::bounds(), isoSurfaceBase::calcCellCuts(), primitiveMesh::cellCentres(), List< T >::clear(), bitSet::count(), isoSurfaceBase::CUT, isoSurfaceBase::cVals_, Foam::dimless, e, PrimitivePatch< FaceList, PointField >::edgeFaces(), PrimitivePatch< FaceList, PointField >::edges(), Foam::endl(), f(), polyMesh::faceNeighbour(), polyMesh::faceOwner(), polyMesh::faces(), isoSurfaceParams::filter(), isoSurfaceParams::filterNames, UList< T >::first(), FixedList< T, N >::first(), forAll, isoSurfaceParams::getClipBounds(), Foam::getMeshPointRef(), TimePaths::globalPath(), Foam::identity(), isoSurfaceBase::ignoreCyclics(), Foam::Info, Foam::inplaceSubset(), isoSurfaceTopo::inplaceSubsetMesh(), HashSet< Key, Hash >::insert(), isoSurfaceTopo::interpolateTemplate(), UList< T >::last(), boundBox::mag(), isoSurfaceBase::mesh(), isoSurfaceBase::mesh_, isoSurfaceBase::meshCells_, PrimitivePatch< FaceList, PointField >::meshPoints(), Foam::minMax(), primitiveMesh::nCells(), primitiveMesh::nFaces(), vtuSizing::nFieldPoints(), primitiveMesh::nInternalFaces(), Foam::nl, IOobject::NO_READ, IOobject::NO_WRITE, primitiveMesh::nPoints(), IOobject::objectRelPath(), volumeType::OUTSIDE, points, polyMesh::points(), PrimitivePatch< FaceList, PointField >::points(), Foam::Pout, GeometricField< Type, PatchField, GeoMesh >::primitiveFieldRef(), word::printf(), isoSurfaceBase::pVals_, vtuCells::reset(), vtuCells::resetShapes(), List< T >::resize(), PackedList< Width >::resize(), HashTable< T, Key, Hash >::resize(), Foam::returnReduce(), s(), Pair< T >::second(), bitSet::set(), vtuSizing::setNumPoints(), MeshedSurface< Face >::size(), MeshedSurface< face >::size(), HashTable< T, Key, Hash >::size(), UList< T >::size(), isoSurfaceParams::snap(), HashTable< T, Key, Hash >::sortedToc(), bitSet::test(), isoSurfaceBase::TETCUT, objectRegistry::time(), TimeState::timeIndex(), List< T >::transfer(), isoSurfaceBase::UNVISITED, regIOobject::write(), writer(), and Foam::Zero.
|
virtualdefault |
Destructor.
|
protected |
Subset the surface using the selected faces.
| [in] | include | the faces to select |
Definition at line 1618 of file isoSurfaceTopo.C.
References Foam::faceMap().
Referenced by isoSurfaceTopo::isoSurfaceTopo().
|
protected |
Interpolates cellData and pointData fields.
Referenced by isoSurfaceTopo::isoSurfaceTopo().
| TypeName | ( | "isoSurfaceTopo" | ) |
Runtime type information.
|
inlinenoexcept |
Per point: originating mesh vertex/cell centre combination.
Vertices less than nPoints are mesh vertices (encoding above), duplicate vertices indicate a snapped point
Definition at line 250 of file isoSurfaceTopo.H.
|
virtual |
interpolate scalar cellValues, pointValues on iso-surface
Reimplemented from isoSurfaceBase.
|
virtual |
interpolate vector cellValues, pointValues on iso-surface
Reimplemented from isoSurfaceBase.
|
virtual |
interpolate sphericalTensor cellValues, pointValues on iso-surface
Reimplemented from isoSurfaceBase.
|
virtual |
interpolate symmTensor cellValues, pointValues on iso-surface
Reimplemented from isoSurfaceBase.
|
virtual |
interpolate tensor cellValues, pointValues on iso-surface
Reimplemented from isoSurfaceBase.
| Foam::tmp< Foam::Field< Type > > interpolateTemplate | ( | const Field< Type > & | cellData, |
| const Field< Type > & | pointData | ||
| ) | const |
Definition at line 33 of file isoSurfaceTopoTemplates.C.
References isoSurfaceBase::cVals_, FixedList< T, N >::first(), fld(), forAll, isoSurfaceBase::iso_, Foam::mag(), isoSurfaceBase::mesh_, isoSurfaceBase::New(), primitiveMesh::nPoints(), isoSurfaceBase::pVals_, s(), Pair< T >::second(), and UList< T >::size().
1.9.5 